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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Wdr36, WD repeat domain 36
Sequence ID:NM_001110015
NM_001110016
NM_144863
Entrez Gene ID:225348
Ensembl ID:ENSMUSG00000038299

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:18 B1|18

Chromosomal Position (from UCSC)

Chromosomal Position:18: 32853106 - 32866420

 Exon Info From UCSC:
NM_001110015
NM_001110016
NM_144863

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5068941Full LengthBC094453WD repeat domain 36
4952187IncompleteBC025047WD repeat domain 36
5068765IncompleteBC025809WD repeat domain 36
5316412IncompleteBC069869WD repeat domain 36
5346181IncompleteBC021497WD repeat domain 36

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_659112  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001110015 NP_001103485    
NM_001110016 NP_001103486    
NM_144863 NP_659112 Q8BHI6 WD40

Related Sequences

 
mRNAGenPeptSwissProt
BC021497 AAH21497 Q8VDN1
BC069869 AAH69869 Q6NSU4
BC094453 AAH94453 Q505Q0
AK041763 BAC31057 Q8BHI6
AK045396 BAC32343 Q8BHI6
AK140019 BAE24212 Q3USW8
AK171683 BAE42609 Q3TAQ9
AK172054 BAE42802 Q3TA68

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Wdr36 NP_001103485 R.norvegicus LOC688637 688637   XP_001067706 95
H.sapiens WDR36 134430 Gene Info NP_644810 89
A.gambiae AgaP_AGAP004557 1274698   XP_313855 45
D.melanogaster CG9799 41647   NP_650284 41
A.thaliana AT4G04940 825833   NP_567275 39
S.pombe SPCC1672.07 2539299   NP_587878 38
N.crassa NCU07011 3877980   XP_961832 36
S.cerevisiae UTP21 851125   NP_013513 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)