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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Srrt, serrate RNA effector molecule homolog (Arabidopsis)
Sequence ID:NM_001109909
NM_001109910
NM_031405
Entrez Gene ID:83701
Ensembl ID:ENSMUSG00000037364

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, pooled tissue, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G2|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 137295710 - 137307666

 Exon Info From UCSC:
NM_001109909
NM_001109910
NM_031405

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30471339Full LengthBC066831arsenate resistance protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_113582  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001109909 NP_001103379    
NM_001109910 NP_001103380    
NM_031405 NP_113582 Q99MR6 ARS2

Related Sequences

 
mRNAGenPeptSwissProt
BC019117 AAH19117 Q99MR6
BC066831 AAH66831 Q99MR6
AK150310 BAE29458 Q99MR6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Srrt NP_113582 H.sapiens SRRT 51593 Gene Info NP_056992 98
D.melanogaster Ars2 35539   NP_724454 51
A.gambiae SRRT_ANOGA 1272662   XP_559074 50
C.elegans E01A2.2 171996   NP_491302 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)