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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Trappc2l, trafficking protein particle complex 2-like
Sequence ID:NM_021502
Entrez Gene ID:59005
Ensembl ID:ENSMUSG00000015013

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 E1|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 122611645 - 122615589

NM_021502 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
168125135525125135592
69241125136965125137137
242329125137820125137907
330409125138207125138286
410609125139290125139489

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1366538Full LengthBC028502trafficking protein particle complex 2-like
40039107IncompleteBC114968trafficking protein particle complex 2-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067477  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021502 NP_067477 Q9JME7 Sedlin_N

Related Sequences

 
mRNAGenPeptSwissProt
BC028502 AAH28502 Q9JME7
BC114968 AAI14969 Q9JME7
AB030200 BAA92763 Q9JME7
AK007526 BAB25089 Q9JME7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Trappc2l NP_067477 H.sapiens TRAPPC2L 51693 Gene Info NP_057293 99
R.norvegicus Trappc2l 292074   NP_001099663 99
D.melanogaster CG9067 36197   NP_610662 55
A.thaliana AT2G20930 816627   NP_565493 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)