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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Adh5, alcohol dehydrogenase 5 (class III), chi polypeptide
Sequence ID:NM_007410
Entrez Gene ID:11532
Ensembl ID:ENSMUSG00000028138

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3 G3|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 138443169 - 138455315

NM_007410 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
130138106127138106156
31132138108253138108354
133274138110046138110187
275362138110815138110902
363582138113862138114081
583843138114207138114467
844979138116705138116840
9801118138117631138117769
11191533138118048138118462

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5691327Full LengthBC062879alcohol dehydrogenase 5 (class III), chi polypeptide
30313517Full LengthBC090978alcohol dehydrogenase 5 (class III), chi polypeptide

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031436  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_007410 NP_031436 P28474 EC 1.1.1.1
EC 1.1.1.284
ADH_zinc_N
ADH_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M84147 AAA68896 P28474 EC 1.1.1.1
EC 1.1.1.284
BC062879 AAH62879 Q6P5I3  
BC090978 AAH90978 P28474 EC 1.1.1.1
EC 1.1.1.284
AK076507 BAC36370 P28474 EC 1.1.1.1
EC 1.1.1.284
AK146949 BAE27558 P28474 EC 1.1.1.1
EC 1.1.1.284
AK159803 BAE35383 P28474 EC 1.1.1.1
EC 1.1.1.284

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Adh5 NP_031436 R.norvegicus Adh5 100145871   NP_001119592 97
H.sapiens ADH5 128 Gene Info NP_000662 93
A.gambiae AgaP_AGAP010499 1275240   XP_314472 74
D.melanogaster Fdh 41311   NP_524310 74
C.elegans H24K24.3 178597   NP_001024016 72
C.elegans Y50D4C.2 178598   NP_503357 70
A.thaliana HOT5 834417   NP_199207 70
S.cerevisiae SFA1 851386   NP_010113 64
S.pombe SPCC13B11.04c 2538802   NP_588247 63
N.crassa NCU06652 3876845   XP_960697 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)