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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ifnk, interferon kappa
Sequence ID:NM_199157
Entrez Gene ID:387510
Ensembl ID:ENSMUSG00000042993

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 A5|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 35152054 - 35154019

NM_199157 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15873509930335099889
5888203510103535101267

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30713338Full LengthBC099376interferon kappa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_954608  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_199157 NP_954608 Q4FZL7
Q7TSL0
Interferon

Related Sequences

 
mRNAGenPeptSwissProt
BC099376 AAH99376 Q4FZL7
Q7TSL0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ifnk NP_954608 R.norvegicus Ifnk 313152   NP_001101395 75
H.sapiens IFNK 56832 Gene Info NP_064509 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)