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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Efcab4a, EF-hand calcium binding domain 4A
Sequence ID:NM_001025103
Entrez Gene ID:213573
Ensembl ID:ENSMUSG00000048200

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 F5|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 141462915 - 141465031

NM_001025103 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
196148646992148647087
97285148649282148649470
286397148649548148649659
398560148650029148650191
561707148650594148650740
708798148650837148650927
799891148651162148651254
8921058148651417148651583
10591130148651664148651735
11311687148651944148652500

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5256663Full LengthBC098333EF-hand calcium binding domain 4A
4910287IncompleteBC034124EF-hand calcium binding domain 4A
4986761IncompleteBC026645EF-hand calcium binding domain 4A
6307316IncompleteBC048916EF-hand calcium binding domain 4A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001020274  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001025103 NP_001020274 Q80ZJ8 efhand

Related Sequences

 
mRNAGenPeptSwissProt
BC026645 AAH26645 Q80ZJ8
BC034124 AAH34124 Q8K046
BC048916 AAH48916 Q80ZJ8
BC098333 AAH98333 Q80ZJ8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Efcab4a NP_001020274 R.norvegicus Efcab4a 309112   NP_001121013 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)