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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ppp1r42, protein phosphatase 1, regulatory subunit 42
Sequence ID:NM_027033
NM_145692
Entrez Gene ID:69312
Ensembl ID:ENSMUSG00000025916

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 A2|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 9995062 - 10009130

 Exon Info From UCSC:
NM_027033
NM_145692

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4503172Full LengthBC022722leucine rich repeat containing 67

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081309  NP_663730  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_027033 NP_081309   LRR_1
NM_145692 NP_663730 Q8R1Z4 LRR_1

Related Sequences

 
mRNAGenPeptSwissProt
BC022722 AAH22722 Q8R1Z4
AK005871 BAB24290 Q8R1Z4
AK015164 BAB29732 Q8R1Z4
AK076637 BAC36427 Q8R1Z4
XM_488884 XP_488884  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ppp1r42 NP_663730 R.norvegicus LOC683514 683514   NP_001121041 94
H.sapiens PPP1R42 286187 Gene Info NP_001013648 88
A.gambiae AgaP_AGAP008815 3291820   XP_557978 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)