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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Esrra, estrogen related receptor, alpha
Sequence ID:NM_007953
Entrez Gene ID:26379
Ensembl ID:ENSMUSG00000024955

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 A|19 3.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:19: 6910981 - 6911548

NM_007953 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
23105669854666986499
1057132669868446987113
1327149469872056987372
1495162369883096988437
1624174069885686988684
1741207769945526994888
2078226469961116996297

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861606Full LengthBC138586estrogen related receptor, alpha
9054244Full LengthBC171958estrogen related receptor, alpha

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031979  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007953 NP_031979   Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
U85259 AAB51250 O08580
BC138586 AAI38587 O08580
BC171958 AAI71958 O08580
AK156371 BAE33690 O08580

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Esrra NP_031979 R.norvegicus Esrra 293701   NP_001008511 100
H.sapiens ESRRA 2101 Gene Info NP_004442 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta