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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Lhx3, LIM homeobox protein 3
Sequence ID:NM_010711
NM_001039653
Entrez Gene ID:16871
Ensembl ID:ENSMUSG00000026934

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 A2-C1|2 16.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 26200215 - 26202866

Transcript StartTranscript EndChromosomal Start Chromosomal End
113002605573126057030
130114692605761326057781
147016212605786926058020
162218242605849326058695
182519962605946926059640
199722082606186426062075

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9087600Full LengthBC150689LIM homeobox protein 3
40130831Full LengthBC132554LIM homeobox protein 3
40130833Full LengthBC132556LIM homeobox protein 3

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001039653 NP_001034742    

Related Sequences

 
mRNAGenPeptSwissProt
L38857 AAA73902 P50481
L38249 AAA98998 P50481
L38248 AAB64178 P50481
BC132554 AAI32555 A2ALD8
BC132556 AAI32557 A2ALD8
BC150689 AAI50690 A2ALD9
AK047273 BAC33011 Q8C8F2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lhx3 NP_001034742 R.norvegicus Lhx3 170671   XP_001059910 99
H.sapiens LHX3 8022 Gene Info NP_055379 94
A.gambiae AgaP_AGAP009088 1280042   XP_319836 62
D.melanogaster Lim3 35184   NP_724161 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)