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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cox4i1, Cytochrome c oxidase subunit IV isoform 1
Sequence ID:NM_009941
Entrez Gene ID:12857
Ensembl ID:ENSMUSG00000031818

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 E1|8 64.0

Chromosomal Position (from UCSC)

Chromosomal Position:8: 120668324 - 120674206

NM_009941 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
166123192189123192254
67140123193208123193281
141308123196624123196791
309440123197120123197251
441679123197870123198108

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40130546Full LengthBC132269cytochrome c oxidase subunit IV isoform 1
40130552Full LengthBC132275cytochrome c oxidase subunit IV isoform 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034071  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009941 NP_034071 P19783 COX4

Related Sequences

 
mRNAGenPeptSwissProt
M37829 AAB02140 P19783
BC132269 AAI32270 A2RSV8
P19783
BC132275 AAI32276 A2RSV8
AK012583 BAB28333 P19783
AK019276 BAB31643 P19783
AK150447 BAE29569 P19783
X54691 CAA38507 P19783

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cox4i1 NP_034071 R.norvegicus Cox4i1 29445   NP_058898 94
H.sapiens COX4I1 1327 Gene Info NP_001852 78
D.melanogaster CG10396 35491   NP_610168 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)