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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ube2b, ubiquitin-conjugating enzyme E2B
Sequence ID:NM_009458
Entrez Gene ID:22210
Ensembl ID:ENSMUSG00000020390

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B1.3|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 51986386 - 52000363

NM_009458 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1816815179864851800311
168217705180211351802201
177118605180489551804984
186118865180887551808900
188719675181131951811399
196821415181379451813967

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40130352Full LengthBC132075ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)
40130354Full LengthBC132077ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033484  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009458 NP_033484   UQ_con

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U57690 AAC52884 P63147 EC 6.3.2.19
BC132075 AAI32076 A2RSE4  
BC132077 AAI32078 A2RSE4  
AK010432 BAB26934 P63147 EC 6.3.2.19
AK011363 BAB27570 P63147 EC 6.3.2.19
AK147785 BAE28135 P63147 EC 6.3.2.19
AK169229 BAE40998 P63147 EC 6.3.2.19
X96859 CAA65602 P63147 EC 6.3.2.19

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ube2b NP_033484 R.norvegicus Ube2b 81816   NP_112400 100
H.sapiens UBE2B 7320 Gene Info NP_003328 100
S.pombe rhp6 2542622   NP_592876 72
S.cerevisiae RAD6 852822   NP_011457 70
N.crassa NCU09731 3880595   XP_964433 68

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)