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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hmg20b, high mobility group 20B
Sequence ID:NM_001163165
NM_001163166
NM_010440
Entrez Gene ID:15353
Ensembl ID:ENSMUSG00000020232

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 C1|10 43.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 81346051 - 81350410

 Exon Info From UCSC:
NM_001163165
NM_001163166
NM_010440

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3485302Full LengthBC003924high mobility group 20 B
4012515Full LengthBC011334high mobility group 20 B
4037291IncompleteBC071217high mobility group 20 B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034570  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001163165 NP_001156637    
NM_001163166 NP_001156638    
NM_010440 NP_034570 Q3U1L0
Q9Z104
HMG_box

Related Sequences

 
mRNAGenPeptSwissProt
AF146224 AAF66708 Q3U1L0
Q9Z104
BC003924 AAH03924 Q05DT2
BC011334 AAH11334 Q3U1L0
Q9Z104
AK153816 BAE32194 Q3U1L0
Q9Z104
AK155615 BAE33346 Q3U1Z7
AK155652 BAE33368 Q3U1X5
AK155890 BAE33486 Q3U1L0
Q9Z104
AL355734 CAB90813 Q9Z104
AL355735 CAB90814 Q9Z104

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hmg20b NP_001156637 R.norvegicus Hmg20b 362825   NP_001102201 99
H.sapiens HMG20B 10362 Gene Info NP_006330 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)