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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Wars, Tryptophanyl-tRNA synthetase
Sequence ID:NM_001164314
NM_001164488
NM_011710
Entrez Gene ID:22375
Ensembl ID:ENSMUSG00000021266

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12|12 F2

Chromosomal Position (from UCSC)

Chromosomal Position:12: 108860031 - 108893198

 Exon Info From UCSC:
NM_001164314
NM_001164488
NM_011710

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2654231Full LengthBC003450tryptophanyl-tRNA synthetase
6813406Full LengthBC046232tryptophanyl-tRNA synthetase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035840  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001164314 NP_001157786      
NM_001164488 NP_001157960      
NM_011710 NP_035840 Q4FJZ4
P32921
EC 6.1.1.2 WHEP-TRS
tRNA-synt_1b

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC003450 AAH03450 Q4FJZ4
P32921
EC 6.1.1.2
BC046232 AAH46232 P32921 EC 6.1.1.2
AK004541 BAB23357 Q3U6U7
P32921
EC 6.1.1.2
AK150090 BAE29299 Q3UDG2  
AK152966 BAE31627 Q3U6U7  
CT010258 CAJ18466 Q4FJZ4  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Wars NP_035840 R.norvegicus Wars 314442   NP_001013188 97
H.sapiens WARS 7453 Gene Info NP_776049 90
A.gambiae AgaP_AGAP003315 1279764   XP_319546 67
D.melanogaster Aats-trp 45399   NP_524826 65
C.elegans wrs-1 180231   NP_507683 63
S.pombe wrs1 2541841   NP_592983 61
N.crassa NCU06722 3877040   XP_960902 61
A.thaliana AT3G04600 819617   NP_001078104 59
S.cerevisiae WRS1 854056   NP_014544 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)