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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Apc, adenomatosis polyposis coli
Sequence ID:NM_007462
Entrez Gene ID:11789
Ensembl ID:ENSMUSG00000005871

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 B1|18 15.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:18: 34220983 - 34272461

 Exon Info From UCSC:
NM_007462

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9055753Full LengthBC141141adenomatosis polyposis coli

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031488  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007462 NP_031488 Q61315 Arm
APC_crr
SAMP
EB1_binding
APC_basic
APC_15aa

Related Sequences

 
mRNAGenPeptSwissProt
M88127 AAB59632 Q61315
BC141141 AAI41142 B2RUG9
L19608 AAN87116  
AK042021 BAC31134 Q8C9I9
AK045053 BAC32198 Q8BRD8
AK080907 BAC38073 Q8BNP7
AK082724 BAC38587 Q8C493
AK142170 BAE24957 Q3UQT2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Apc NP_031488 R.norvegicus Apc 24205   NP_036631 93
H.sapiens APC 324 Gene Info NP_000029 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta