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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hdac7, histone deacetylase 7
Sequence ID:NM_001204275
NM_001204276
NM_001204277
NM_001204278
NM_001204279
NM_001204280
NM_001204281
NM_019572
Entrez Gene ID:56233
Ensembl ID:ENSMUSG00000022475

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15|15 F2

Chromosomal Position (from UCSC)

Chromosomal Position:15: 97793642 - 97831377


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6826982Full LengthBC057332histone deacetylase 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062518  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001204275 NP_001191204      
NM_001204276 NP_001191205      
NM_001204277 NP_001191206      
NM_001204278 NP_001191207      
NM_001204279 NP_001191208      
NM_001204280 NP_001191209      
NM_001204281 NP_001191210      
NM_019572 NP_062518 Q8C2B3 EC 3.5.1.98 Hist_deacetyl

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF207749 AAF31419 Q8C2B3 EC 3.5.1.98
BC057332 AAH57332 Q8C2B3 EC 3.5.1.98
AY943911 AAY22407 Q1EDY4  
AY943912 AAY22408 Q1EDY5  
AY943913 AAY22409 Q1EDY4  
AK030863 BAC27161 Q8C2B3 EC 3.5.1.98
AK036586 BAC29493 Q8C2B3 EC 3.5.1.98
AK044287 BAC31856 Q8C2B3 EC 3.5.1.98
AK088828 BAC40598 Q8C2B3 EC 3.5.1.98
AK088945 BAC40666 Q8C2B3 EC 3.5.1.98
AK131123 BAD21373 Q6KAT4  
AK146315 BAE27070 Q3UJT5  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hdac7 NP_062518 R.norvegicus Hdac7 84582   XP_345869 98
H.sapiens HDAC7 51564 Gene Info NP_056216 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)