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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Rad1, RAD1 homolog (S. pombe)
Sequence ID:NM_011232
Entrez Gene ID:19355
Ensembl ID:ENSMUSG00000022248

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15|15 A2

Chromosomal Position (from UCSC)

Chromosomal Position:15: 10486120 - 10493643

NM_011232 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12311041578810416018
2324951041620710416470
4966041041774410417852
6058631042001010420268
8649621042251910422617
96315001042290810423445

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6508142Full LengthBC048693RAD1 homolog (S. pombe)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035362  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_011232 NP_035362 Q9QWZ1 EC 3.1.11.2 Rad1

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF058394 AAC14139 Q9QWZ1 EC 3.1.11.2
AF038841 AAC27248 Q9QWZ1 EC 3.1.11.2
AF084514 AAC35551 Q9QWZ1 EC 3.1.11.2
AF073523 AAC95465 Q9QWZ1 EC 3.1.11.2
AF076842 AAC95524 Q9QWZ1 EC 3.1.11.2
AF074718 AAC98094 Q9QWZ1 EC 3.1.11.2
BC048693 AAH48693 Q9QWZ1 EC 3.1.11.2
AK146533 BAE27240 Q9QWZ1 EC 3.1.11.2
AK148098 BAE28343 Q9QWZ1 EC 3.1.11.2
AK150466 BAE29583 Q9QWZ1 EC 3.1.11.2
AK168588 BAE40457 Q9QWZ1 EC 3.1.11.2
AJ004976 CAA06250 Q9QWZ1 EC 3.1.11.2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rad1 NP_035362 R.norvegicus Rad1 294800   NP_001099889 98
H.sapiens RAD1 5810 Gene Info NP_002844 91
A.gambiae AgaP_AGAP002255 1269306   XP_307928 34
N.crassa NCU00942 3880892   XP_964768 34
S.pombe rad1 2542558   NP_594809 32
C.elegans mrt-2 176608   NP_499521 30
D.melanogaster CG34314 5740299   NP_477440 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta