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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Aspn, asporin
Sequence ID:NM_001172481
NM_025711
Entrez Gene ID:66695
Ensembl ID:ENSMUSG00000021388

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13|13 B1

Chromosomal Position (from UCSC)

Chromosomal Position:13: 49551645 - 49566654

 Exon Info From UCSC:
NM_001172481
NM_025711

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1365428Full LengthBC034888asporin
40131207Full LengthBC145904asporin
40131233Full LengthBC145930asporin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079987  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001172481 NP_001165952    
NM_025711 NP_079987 Q99MQ4 LRR_1
LRRNT

Related Sequences

 
mRNAGenPeptSwissProt
BC034888 AAH34888 Q99MQ4
BC145904 AAI45905 A6H6K1
BC145930 AAI45931 A6H6K1
AF316825 AAK35162 Q99MQ4
AK021386 BAB32393 Q9CTL6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Aspn NP_001165952 R.norvegicus Aspn 306805   NP_001014030 97
H.sapiens ASPN 54829 Gene Info NP_060150 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)