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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Chi3l1, chitinase 3-like 1
Sequence ID:NM_007695
Entrez Gene ID:12654
Ensembl ID:ENSMUSG00000064246

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 E4|1 72.3 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 134182463 - 134190028

NM_007695 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1149136078980136079128
150179136079356136079385
180384136080073136080277
385441136080700136080756
442592136081725136081875
593714136083081136083202
715838136084446136084569
8391021136085071136085253
10221138136085773136085889
11391687136086057136086605

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3582304Full LengthBC005611chitinase 3-like 1
3583267Full LengthBC004734chitinase 3-like 1
3601796Full LengthBC003780chitinase 3-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031721  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007695 NP_031721 Q61362 Glyco_hydro_18

Related Sequences

 
mRNAGenPeptSwissProt
BC003780 AAH03780 Q61362
BC004734 AAH04734 Q61362
BC005611 AAH05611 Q61362
EU313768 ABY53363 B0FEU7
AK051475 BAC34654 Q61362
AK155412 BAE33251 Q3U291
X93035 CAA63603 Q61362
CT010283 CAJ18491 Q61362

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chi3l1 NP_031721 R.norvegicus Chi3l1 89824   NP_446012 77
H.sapiens CHI3L1 1116 Gene Info NP_001267 74
N.crassa NCU04554 3872093   XP_955945 35
S.cerevisiae CTS2 851977   NP_010659 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)