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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cmas, cytidine monophospho-N-acetylneuraminic acid synthetase
Sequence ID:NM_009908
Entrez Gene ID:12764
Ensembl ID:ENSMUSG00000030282

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6 G3|6 74.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 142756772 - 142775708

NM_009908 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1341142705205142705545
342484142712806142712948
485640142713073142713228
641774142716323142716456
775869142719042142719136
8701041142719685142719856
10421195142720634142720787
11961758142723669142724231

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2647633Full LengthBC031500cytidine monophospho-N-acetylneuraminic acid synthetase
6398450Full LengthBC063776cytidine monophospho-N-acetylneuraminic acid synthetase
3585013IncompleteBC004606cytidine monophospho-N-acetylneuraminic acid synthetase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034038  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_009908 NP_034038 Q99KK2 EC 2.7.7.43 CTP_transf_3

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC004606 AAH04606 Q99KK2 EC 2.7.7.43
BC031500 AAH31500 Q99KK2 EC 2.7.7.43
BC063776 AAH63776 Q99KK2 EC 2.7.7.43
AK087150 BAC39813 Q99KK2 EC 2.7.7.43
AJ006215 CAA06915 Q99KK2 EC 2.7.7.43

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cmas NP_034038 R.norvegicus Cmas 312826   NP_001009419 99
H.sapiens CMAS 55907 Gene Info NP_061156 94
A.gambiae AgaP_AGAP004527 1274672   XP_313827 45
D.melanogaster Csas 317923   NP_730474 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)