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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pcgf5, polycomb group ring finger 5
Sequence ID:NM_029508
Entrez Gene ID:76073
Ensembl ID:ENSMUSG00000024805

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 C2|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 36348453 - 36456217

NM_029508 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1933645355636453648
943743648644536486725
3754713650905936509155
4725273651164436511699
5285873651179236511851
5887363651448836514636
7378353651733336517431
8369253651947736519566
92615093653011036530693

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862280Full LengthBC139258polycomb group ring finger 5
8862281Full LengthBC139259polycomb group ring finger 5
9054156Full LengthBC145590polycomb group ring finger 5
9054157Full LengthBC145591polycomb group ring finger 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_083784  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_029508 NP_083784   zf-C3HC4

Related Sequences

 
mRNAGenPeptSwissProt
BC139258 AAI39259 Q3UK78
BC139259 AAI39260 Q3UK78
BC145590 AAI45591 Q3UK78
BC145591 AAI45592 B7ZP24
AK002387 BAB22061 Q3UK78
AK017984 BAB31023 Q3UK78
AK146133 BAE26924 Q3UK78

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pcgf5 NP_083784 R.norvegicus Pcgf5 681178   NP_001123354 99
H.sapiens PCGF5 84333 Gene Info NP_115749 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)