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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Sigirr, single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
Sequence ID:NM_023059
Entrez Gene ID:24058
Ensembl ID:ENSMUSG00000025494

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 F5|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 141091175 - 141094902

NM_023059 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1327148277073148277399
328517148277701148277890
518668148278053148278203
669771148278279148278381
772915148278484148278627
9161056148278876148279016
10571187148279098148279228
11881386148279625148279823
13871922148280680148281215
19231990148286377148286444

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4240425Full LengthBC010806single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
4974962Full LengthBC094069single immunoglobulin and toll-interleukin 1 receptor (TIR) domain

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_075546  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_023059 NP_075546 Q9JLZ8 ig
TIR

Related Sequences

 
mRNAGenPeptSwissProt
AF113795 AAF26200 Q9JLZ8
AF239957 AAF44701  
BC010806 AAH10806 Q9JLZ8
Q3UKS3
BC094069 AAH94069 Q9JLZ8
AK133518 BAE21700 Q3V005
AK145889 BAE26728 Q9JLZ8
Q3UKS3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sigirr NP_075546 R.norvegicus Sigirr 309106   NP_001020058 95
H.sapiens SIGIRR 59307 Gene Info NP_068577 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)