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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Opcml, Opioid binding protein/cell adhesion molecule-like
Sequence ID:NM_177906
Entrez Gene ID:330908
Ensembl ID:ENSMUSG00000062257

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 A4|9 10.0

Chromosomal Position (from UCSC)

Chromosomal Position:9: 27791301 - 28030026

NM_177906 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11782759885327599030
1792632821191228211996
2644962848271828482950
4976222862087128620996
6237572870910328709237
7588782870963928709759
87910302871079928710950
103159922872767128732632

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30542711Full LengthBC076581opioid binding protein/cell adhesion molecule-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_808574  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_177906 NP_808574 Q6DFY2 ig
V-set

Related Sequences

 
mRNAGenPeptSwissProt
BC076581 AAH76581 Q6DFY2
AK028345 BAC25895 Q8BMT5
AK158538 BAE34550 Q3TYL3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Opcml NP_808574 R.norvegicus Opcml 116597   NP_446300 97
H.sapiens OPCML 4978 Gene Info NP_002536 95
D.melanogaster CG31646 33795   NP_723103 36
A.gambiae AgaP_AGAP010222 1279645   XP_554133 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)