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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Hps5, Hermansky-Pudlak syndrome 5 homolog (human)
Sequence ID:NM_001005247
NM_001005248
NM_001167864
Entrez Gene ID:246694
Ensembl ID:ENSMUSG00000014418

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 B4|7 25.0

Chromosomal Position (from UCSC)

Chromosomal Position:7: 46760465 - 46795678

 Exon Info From UCSC:
NM_001005247
NM_001005248
NM_001167864

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6405811Full LengthBC082542Hermansky-Pudlak syndrome 5 homolog (human)
4459498IncompleteBC046405Hermansky-Pudlak syndrome 5 homolog (human)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001005247 NP_001005247 P59438  
NM_001005248 NP_001005248 P59438  
NM_001167864 NP_001161336    

Related Sequences

 
mRNAGenPeptSwissProt
BC046405 AAH46405 P59438
BC082542 AAH82542 Q640Q9
AF534396 AAO25958 P59438
AF534397 AAO25959 P59438
AF534398 AAO25960 P59438
AF534399 AAO25961 P59438
AK129265 BAC98075 Q6ZQ01
AK161039 BAE36163 Q3TU08

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hps5 NP_001005247 R.norvegicus Hps5 308598   NP_001129084 91
H.sapiens HPS5 11234 Gene Info NP_852608 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)