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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sidt2, SID1 transmembrane family, member 2
Sequence ID:NM_172257
Entrez Gene ID:214597
Ensembl ID:ENSMUSG00000034908

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9 A5.2|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 45946983 - 45955181

 Exon Info From UCSC:
NM_172257

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5052849Full LengthBC051101SID1 transmembrane family, member 2
5321190Full LengthBC023957SID1 transmembrane family, member 2
3595651IncompleteBC006873SID1 transmembrane family, member 2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_172257 NP_758461 Q8CIF6
Q3U1L8
 

Related Sequences

 
mRNAGenPeptSwissProt
BC006873 AAH06873 Q8CIF6
BC023957 AAH23957 Q8CIF6
Q3U1L8
BC051101 AAH51101 Q8CIF6
AK152371 BAE31161  
AK155875 BAE33477 Q8CIF6
Q3U1L8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sidt2 NP_758461 R.norvegicus Sidt2 315617   NP_001101612 99
H.sapiens SIDT2 51092 Gene Info NP_001035545 95
C.elegans tag-130 181125   NP_509489 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)