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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. U2af1, U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
Sequence ID:NM_001163769
NM_024187
Entrez Gene ID:108121
Ensembl ID:ENSMUSG00000061613

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 B1|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 31647082 - 31658715

 Exon Info From UCSC:
NM_001163769
NM_024187

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40100558Full LengthBC115479U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
40100559Full LengthBC115480U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
3487573IncompleteBC002184U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
4481340IncompleteBC069888U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
4947838IncompleteBC033478U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_077149  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001163769 NP_001157241    
NM_024187 NP_077149   RRM_1
zf-CCCH

Related Sequences

 
mRNAGenPeptSwissProt
BC002184 AAH02184 Q9D883
BC115479 AAI15480 Q14C24
BC115480 AAI15481 Q14C24
AK008332 BAB25609 Q9D883
AK012849 BAB28511 Q9D883
AK088979 BAC40683 Q9D883
AK150872 BAE29923 Q9D883

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus U2af1 NP_077149 H.sapiens U2AF1 7307 Gene Info NP_006749 100
A.gambiae AgaP_AGAP002956 1273007   XP_311943 81
D.melanogaster U2af38 33201   NP_477208 79
C.elegans uaf-2 178489   NP_503036 64
S.pombe SPAP8A3.06 2542482   NP_594945 61
N.crassa NCU03261 3880563   XP_964414 59
A.thaliana ATU2AF35A 839657   NP_174086 57
A.thaliana U2AF35B 834293   NP_199096 56
P.falciparum PF11_0200 810747   XP_001347871 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)