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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pinx1, PIN2/TERF1 interacting, telomerase inhibitor 1
Sequence ID:NM_028228
Entrez Gene ID:72400
Ensembl ID:ENSMUSG00000021958

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14|14 C3

Chromosomal Position (from UCSC)

Chromosomal Position:14: 63860363 - 63919804

NM_028228 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11366447914864479283
1372466448305264483161
2473396448493964485031
3404186448735564487433
4195116449113864491230
5125886449694864497024
58913516453793364538695

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40102952Full LengthBC115636RIKEN cDNA 2610028A01 gene
3371824IncompleteBC065781RIKEN cDNA 2610028A01 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082504  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_028228 NP_082504 Q9CZX5 G-patch

Related Sequences

 
mRNAGenPeptSwissProt
BC115636 AAI15637 Q9CZX5
AF421879 AAL32445 Q9CZX5
AF321817 AAL37221 Q9CZX5
AK075840 BAC35998 Q9CZX5
AK012057 BAE43228 Q9CZX5
AJ344106 CAC51439 Q9CZX5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pinx1 NP_082504 R.norvegicus Pinx1 305963   NP_001076806 91
H.sapiens PINX1 54984 Gene Info NP_060354 74
D.melanogaster CG11180 37330   NP_611495 39
C.elegans T23G7.3 174456   NP_495955 38
A.gambiae AgaP_AGAP008951 1279919   XP_319704 37
S.cerevisiae PXR1 853197   NP_011796 37
N.crassa NCU02528 3881857   XP_965659 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)