Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lsm7, LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
Sequence ID:NM_025349
Entrez Gene ID:66094
Ensembl ID:ENSMUSG00000035215

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 C1|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 80852823 - 80855197

NM_025349 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
202958031556980315844
2963678031650280316573
3684588031736280317452
4594878031792580317953

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1382565Full LengthBC027511LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
5711629Full LengthBC081444LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079625  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025349 NP_079625 Q9CQQ8 LSM

Related Sequences

 
mRNAGenPeptSwissProt
BC027511 AAH27511 Q9CQQ8
BC081444 AAH81444 Q9CQQ8
AK003062 BAB22540 Q9CQQ8
AK007462 BAB25051 Q9CQQ8
AK012446 BAB28245 Q9CQQ8
AK013355 BAB28806 Q9CQQ8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lsm7 NP_079625 M.musculus Gm10146 100041500 Gene Info XP_001478216 100
R.norvegicus Lsm7 362829   NP_001102202 99
H.sapiens LSM7 51690 Gene Info NP_057283 98
A.gambiae AgaP_AGAP008122 1277833   XP_317337 79
D.melanogaster LSm7 35003   NP_609807 76
N.crassa NCU01930 3880263   XP_964114 61
S.pombe lsm7 2538964   NP_588340 61
A.thaliana AT2G03870 814913   NP_178480 58
C.elegans lsm-7 177988   NP_502034 57
S.cerevisiae LSM7 855575   NP_014252 49
P.falciparum PFL0460w 811145   XP_001350501 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)