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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Adrm1, adhesion regulating molecule 1
Sequence ID:NM_019822
Entrez Gene ID:56436
Ensembl ID:ENSMUSG00000039041

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, synovium, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 H4|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 180171672 - 180176283

NM_019822 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1101179906292179906392
102315179906738179906951
316432179907560179907676
433556179908614179908737
557643179909013179909099
644725179909569179909650
726958179909864179910096
9591116179910302179910459
11171219179910558179910660
12201429179910778179910987

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3586698Full LengthBC008974adhesion regulating molecule 1
4008987Full LengthBC031517adhesion regulating molecule 1
4188750Full LengthBC019746adhesion regulating molecule 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062796  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019822 NP_062796 Q9JKV1 ARM_1

Related Sequences

 
mRNAGenPeptSwissProt
AF225959 AAF33401 Q9JKV1
BC008974 AAH08974 Q9JKV1
BC019746 AAH19746 Q8VCI8
BC031517 AAH31517 Q9JKV1
AK075674 BAC35889 Q9JKV1
AK145474 BAE26457 Q9JKV1
AK145792 BAE26653 Q9JKV1
AK166878 BAE39089 Q9JKV1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Adrm1 NP_062796 R.norvegicus Adrm1 65138   NP_113896 99
H.sapiens ADRM1 11047 Gene Info NP_008933 97
A.gambiae AgaP_AGAP004758 1278467   XP_001689089 49
D.melanogaster CG13349 36545   NP_001137664 49
A.thaliana RPN13 817200   NP_565626 43
C.elegans C56G2.7 3565888   NP_498387 40
S.pombe SPBC342.04 2540980   NP_596747 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)