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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Foxj1, forkhead box J1
Sequence ID:NM_008240
Entrez Gene ID:15223
Ensembl ID:ENSMUSG00000034227

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 E2|11 78.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 116330706 - 116335291

NM_008240 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
241795116192019116193790
17962462116195355116196021
24632599116196531116196667

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6808210Full LengthBC082543forkhead box J1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032266  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008240 NP_032266 Q640Q8
Q61660
Fork_head

Related Sequences

 
mRNAGenPeptSwissProt
L13204 AAA21689 Q61660
BC082543 AAH82543 Q640Q8
AK140847 BAE24495 Q61660

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Foxj1 NP_032266 H.sapiens FOXJ1 2302 Gene Info NP_001445 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)