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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lefty1, left right determination factor 1
Sequence ID:NM_010094
Entrez Gene ID:13590
Ensembl ID:ENSMUSG00000038793

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1|1 F

Chromosomal Position (from UCSC)

Chromosomal Position:1: 180935058 - 180938400

NM_010094 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1321182865169182865489
322568182866677182866923
569814182867139182867384
8151604182867742182868531

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30005856Full LengthBC050221left right determination factor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034224  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010094 NP_034224 Q64280 TGFb_propeptide

Related Sequences

 
mRNAGenPeptSwissProt
BC050221 AAH50221 Q64280
D83921 BAA12121 Q64280
AK131943 BAE20889 Q64280
AJ000082 CAA03909 Q64280
Z73151 CAA97497 Q64280

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lefty1 NP_034224 R.norvegicus Lefty1 498299   NP_001102550 93
H.sapiens LEFTY1 10637 Gene Info NP_066277 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)