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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Bnip3, BCL2/adenovirus E1B interacting protein 3
Sequence ID:NM_009760
Entrez Gene ID:12176
Ensembl ID:ENSMUSG00000078566

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, synovium, testis, thymus, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7|7 F5

Chromosomal Position (from UCSC)

Chromosomal Position:7: 138891250 - 138909469

NM_009760 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11125146082518146083642
11261275146086062146086211
12761382146086292146086398
13831464146089678146089759
14651612146090363146090510
16131756146101045146101188

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6390074Full LengthBC046603BCL2/adenovirus E1B interacting protein 3
3482880IncompleteBC033278BCL2/adenovirus E1B interacting protein 1, NIP3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033890  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009760 NP_033890 O55003 BNIP3

Related Sequences

 
mRNAGenPeptSwissProt
AF041054 AAD02922 O55003
BC046603 AAH46603 O55003
AK014223 BAB29214 O55003
AK075943 BAC36072 O55003
AK152610 BAE31356 O55003

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Bnip3 NP_033890 R.norvegicus Bnip3 84480   NP_445872 99
H.sapiens BNIP3 664 Gene Info NP_004043 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)