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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Bpifb1, BPI fold containing family B, member 1
Sequence ID:NM_001012392
NM_153418
Entrez Gene ID:228801
Ensembl ID:ENSMUSG00000027485

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 H1|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 154190822 - 154220342

 Exon Info From UCSC:
NM_001012392
NM_153418

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30298932Full LengthBC100436cDNA sequence U46068
30300112Full LengthBC060982cDNA sequence U46068

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001012392  NP_700467  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001012392 NP_001012392   LBP_BPI_CETP
NM_153418 NP_700467 Q61114 LBP_BPI_CETP

Related Sequences

 
mRNAGenPeptSwissProt
U46068 AAA87581 Q61114
BC060982 AAH60982 Q61114
BC100436 AAI00437 Q61114

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Bpifb1 NP_001012392 R.norvegicus Bpifb1 499926   NP_001071148 94
H.sapiens BPIFB1 92747 Gene Info NP_149974 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)