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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Gm13280, Predicted gene 13280
Sequence ID:NM_206867
Entrez Gene ID:230398
Ensembl ID:ENSMUSG00000078355

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 C4|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 88676286 - 88676855

NM_206867 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15708832219088322759

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40043682IncompleteBC114392predicted gene, OTTMUSG00000011275
100014575BC141569predicted gene, OTTMUSG00000011275

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_996750  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_206867 NP_996750 Q810G1 Interferon

Related Sequences

 
mRNAGenPeptSwissProt
BC114392 AAI14393 Q1WWN2
BC141569 AAI41570  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gm13280 NP_996750 M.musculus Ifna1 15962 Gene Info NP_034632 88
M.musculus Gm12597 242517 Gene Info NP_996753 84
M.musculus Ifna14 404549 Gene Info NP_996858 84
M.musculus Ifna12 242519 Gene Info NP_796335 83
M.musculus Ifna5 15968 Gene Info NP_034635 83
M.musculus Ifna11 15964 Gene Info NP_032359 83
M.musculus Ifnab 15974 Gene Info NP_032362 82
M.musculus Ifna6 15969 Gene Info NP_996754 82
M.musculus Ifna13 230396 Gene Info NP_796321 81
M.musculus Ifna7 15970 Gene Info NP_032360 81
M.musculus Ifna9 15972 Gene Info NP_034637 80
M.musculus Ifna2 15965 Gene Info NP_034633 80
R.norvegicus RGD1561246 502959   XP_578464 77
R.norvegicus Ifna5 690894   XP_001076062 76
R.norvegicus LOC680208 680208   XP_001056120 76
H.sapiens IFNA1 3439 Gene Info NP_076918 63
H.sapiens IFNA13 3447 Gene Info NP_008831 62

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)