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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Vmn1r216, vomeronasal 1 receptor 216
Sequence ID:NM_134245
Entrez Gene ID:171279
Ensembl ID:ENSMUSG00000057799

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 A3.1|13

Chromosomal Position (from UCSC)

Chromosomal Position:13: 23099070 - 23100129

NM_134245 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18972319101723191913

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40130953Full LengthBC145650vomeronasal 1 receptor, I10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_599006  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_134245 NP_599006 Q8R257 V1R

Related Sequences

 
mRNAGenPeptSwissProt
BC145650 AAI45651 A6H5V2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vmn1r216 NP_599006 M.musculus Vmn1r202 171258 Gene Info NP_598985 85
M.musculus Vmn1r223 100036518 Gene Info NP_001076780 85
M.musculus Vmn1r193 171259 Gene Info NP_598986 84
M.musculus Vmn1r204 632793 Gene Info NP_001039009 81
M.musculus Vmn1r218 171256 Gene Info NP_598983 66
M.musculus Vmn1r194 626299 Gene Info NP_001074441 65
M.musculus Vmn1r192 252907 Gene Info NP_665844 65
M.musculus Vmn1r198 171254 Gene Info NP_598981 64
M.musculus Vmn1r215 171253 Gene Info NP_598980 63
M.musculus Vmn1r201 171255 Gene Info NP_598982 63
M.musculus Vmn1r195 171257 Gene Info NP_598984 63
M.musculus Vmn1r-ps103 171245 Gene Info NP_598972 51
M.musculus Vmn1r200 171246 Gene Info NP_598973 49
M.musculus Vmn1r205 171251 Gene Info NP_598978 49
M.musculus Vmn1r212 171275 Gene Info NP_599002 48
M.musculus Vmn1r208 171252 Gene Info NP_598979 48
M.musculus Vmn1r210 171269 Gene Info NP_598996 48
M.musculus Vmn1r222 171274 Gene Info NP_599001 47
M.musculus Vmn1r207-ps 432735 Gene Info NP_001160181 47
M.musculus Vmn1r189 252906 Gene Info NP_665843 47
M.musculus Vmn1r221 100312485 Gene Info NP_001161014 47
M.musculus Vmn1r220 171271 Gene Info NP_598998 47
M.musculus Vmn1r203 171270 Gene Info NP_598997 47
M.musculus Vmn1r211 171277 Gene Info NP_599004 47
M.musculus Vmn1r217 171273 Gene Info NP_599000 46
M.musculus Vmn1r188 252912 Gene Info NP_665849 46
M.musculus Vmn1r206 171250 Gene Info NP_598977 46
M.musculus Vmn1r197 171278 Gene Info NP_599005 46
M.musculus Vmn1r191 632534 Gene Info NP_665848 46
M.musculus Vmn1r209 432736 Gene Info NP_001013809 46
M.musculus Vmn1r213 171249 Gene Info NP_598976 45
M.musculus Vmn1r214 171248 Gene Info NP_598975 45
M.musculus Vmn1r196 100312484 Gene Info NP_001161013 45
M.musculus Vmn1r219 171272 Gene Info NP_598999 45
M.musculus Vmn1r199 171247 Gene Info NP_598974 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)