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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Vmn1r195, vomeronasal 1 receptor 195
Sequence ID:NM_134223
Entrez Gene ID:171257
Ensembl ID:ENSMUSG00000069296

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 A3.1|13

Chromosomal Position (from UCSC)

Chromosomal Position:13: 22278316 - 22279404

NM_134223 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
110882237018522371272

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8734082Full LengthBC119333vomeronasal 1 receptor, I6
40126265Full LengthBC116946vomeronasal 1 receptor, I6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598984  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_134223 NP_598984 Q8R260 V1R

Related Sequences

 
mRNAGenPeptSwissProt
BC116946 AAI16947 Q5SVD6
BC119333 AAI19334 Q5SVD6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vmn1r195 NP_598984 M.musculus Vmn1r223 100036518 Gene Info NP_001076780 67
M.musculus Vmn1r204 632793 Gene Info NP_001039009 65
M.musculus Vmn1r193 171259 Gene Info NP_598986 65
M.musculus Vmn1r216 171279 Gene Info NP_599006 63
M.musculus Vmn1r198 171254 Gene Info NP_598981 63
M.musculus Vmn1r202 171258 Gene Info NP_598985 63
M.musculus Vmn1r201 171255 Gene Info NP_598982 62
M.musculus Vmn1r192 252907 Gene Info NP_665844 62
M.musculus Vmn1r218 171256 Gene Info NP_598983 62
M.musculus Vmn1r215 171253 Gene Info NP_598980 62
M.musculus Vmn1r194 626299 Gene Info NP_001074441 60
M.musculus Vmn1r211 171277 Gene Info NP_599004 46
M.musculus Vmn1r222 171274 Gene Info NP_599001 46
M.musculus Vmn1r-ps103 171245 Gene Info NP_598972 46
M.musculus Vmn1r197 171278 Gene Info NP_599005 45
M.musculus Vmn1r212 171275 Gene Info NP_599002 45
M.musculus Vmn1r220 171271 Gene Info NP_598998 44
M.musculus Vmn1r200 171246 Gene Info NP_598973 44
M.musculus Vmn1r214 171248 Gene Info NP_598975 44
M.musculus Vmn1r203 171270 Gene Info NP_598997 44
M.musculus Vmn1r196 100312484 Gene Info NP_001161013 44
M.musculus Vmn1r217 171273 Gene Info NP_599000 44
M.musculus Vmn1r208 171252 Gene Info NP_598979 44
M.musculus Vmn1r188 252912 Gene Info NP_665849 44
M.musculus Vmn1r191 632534 Gene Info NP_665848 43
M.musculus Vmn1r207-ps 432735 Gene Info NP_001160181 43
M.musculus Vmn1r205 171251 Gene Info NP_598978 43
M.musculus Vmn1r210 171269 Gene Info NP_598996 43
M.musculus Vmn1r221 100312485 Gene Info NP_001161014 42
M.musculus Vmn1r209 432736 Gene Info NP_001013809 42
M.musculus Vmn1r199 171247 Gene Info NP_598974 42
M.musculus Vmn1r189 252906 Gene Info NP_665843 42
M.musculus Vmn1r206 171250 Gene Info NP_598977 42
M.musculus Vmn1r213 171249 Gene Info NP_598976 41
M.musculus Vmn1r219 171272 Gene Info NP_598999 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)