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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Vmn1r21, vomeronasal 1 receptor 21
Sequence ID:NM_134183
Entrez Gene ID:171201
Ensembl ID:ENSMUSG00000058588

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 B3|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 57843463 - 57844498

NM_134183 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18945779355757794450

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40129722Full LengthBC120799vomeronasal 1 receptor, C28
40129724Full LengthBC120801vomeronasal 1 receptor, C28

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598944  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_134183 NP_598944 Q8R2C6 V1R

Related Sequences

 
mRNAGenPeptSwissProt
BC120799 AAI20800 Q8R2C6
BC120801 AAI20802 Q8R2C6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vmn1r21 NP_598944 R.norvegicus Vom1r88 494233   NP_001009513 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)