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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Vmn1r5, vomeronasal 1 receptor 5
Sequence ID:NM_134174
Entrez Gene ID:171192
Ensembl ID:ENSMUSG00000090346

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 B3|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 56985294 - 56986350

NM_134174 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19485693533556936282

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861087Full LengthBC138068vomeronasal 1 receptor, C19
8861088Full LengthBC138069vomeronasal 1 receptor, C19

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598935  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_134174 NP_598935 Q8R2D5 V1R

Related Sequences

 
mRNAGenPeptSwissProt
BC138068 AAI38069 B2RQT2
BC138069 AAI38070 B2RQT2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vmn1r5 NP_598935 M.musculus Vmn1r6 171193 Gene Info NP_598936 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)