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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Vmn1r17, vomeronasal 1 receptor 17
Sequence ID:NM_134171
Entrez Gene ID:171189
Ensembl ID:ENSMUSG00000093411

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 B3|6

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

NM_134171 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19125731046057311371

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100014481BC140447vomeronasal 1 receptor, C16

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598932  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_134171 NP_598932 Q8R2D8 V1R

Related Sequences

 
mRNAGenPeptSwissProt
BC140447 AAI40448  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vmn1r17 NP_598932 M.musculus Vmn1r31 626828 Gene Info NP_001160201 90
R.norvegicus Vom1r79 494227   NP_001009508 86
R.norvegicus Vom1r73 494271   NP_001008922 84
R.norvegicus Vom1r78 494273   NP_001008924 82
R.norvegicus Vom1r77 494274   NP_001008926 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)