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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Vmn1r40, vomeronasal 1 receptor 40
Sequence ID:NM_053228
Entrez Gene ID:113855
Ensembl ID:ENSMUSG00000096051

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 D1|6

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

NM_053228 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19338966419689665128

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100014657Full LengthBC141626vomeronasal 1 receptor, B7
100014237BC140250vomeronasal 1 receptor, B7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_444458  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_053228 NP_444458 Q9EQ46 V1R

Related Sequences

 
mRNAGenPeptSwissProt
BC140250 AAI40251  
BC141626 AAI41627  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vmn1r40 NP_444458 M.musculus Vmn1r49 24112 Gene Info NP_036041 82
M.musculus Vmn1r41 113857 Gene Info NP_444460 82
M.musculus Vmn1r239-ps 100504631   XP_003085359 82
M.musculus Vmn1r44 113854 Gene Info NP_444457 81
M.musculus Vmn1r53 113853 Gene Info NP_444456 81
M.musculus Vmn1r46 113856 Gene Info NP_444459 78
R.norvegicus Vom1r101 286892   NP_775135 77
M.musculus Vmn1r50 113852 Gene Info NP_444455 76
R.norvegicus Vom1r96 494275   NP_001008927 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)