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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Vmn1r44, vomeronasal 1 receptor 44
Sequence ID:NM_053227
Entrez Gene ID:113854
Ensembl ID:ENSMUSG00000068234

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 D1|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 89893273 - 89894205

NM_053227 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19338984326789844199

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9088001Full LengthBC151088vomeronasal 1 receptor, B4
40050757IncompleteBC107184vomeronasal 1 receptor, B4
40050758IncompleteBC107185vomeronasal 1 receptor, B4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_444457  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_053227 NP_444457 Q9EQ47 V1R

Related Sequences

 
mRNAGenPeptSwissProt
BC107184 AAI07185 Q9EQ47
BC107185 AAI07186 Q9EQ47
BC151088 AAI51089 Q9EQ47

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vmn1r44 NP_444457 M.musculus Vmn1r49 24112 Gene Info NP_036041 83
M.musculus Vmn1r53 113853 Gene Info NP_444456 83
M.musculus Vmn1r40 113855 Gene Info NP_444458 81
M.musculus Vmn1r46 113856 Gene Info NP_444459 81
M.musculus Vmn1r41 113857 Gene Info NP_444460 80
M.musculus Vmn1r239-ps 100504631   XP_003085359 79
R.norvegicus Vom1r101 286892   NP_775135 78
M.musculus Vmn1r50 113852 Gene Info NP_444455 78
R.norvegicus Vom1r96 494275   NP_001008927 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)