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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ifna9, interferon alpha 9
Sequence ID:NM_010507
Entrez Gene ID:15972
Ensembl ID:ENSMUSG00000095270

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 C4|4 42.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 88591812 - 88592380

NM_010507 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15738823771688238288

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40091178IncompleteBC117775interferon alpha 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034637  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010507 NP_034637 P09235 Interferon

Related Sequences

 
mRNAGenPeptSwissProt
BC117775 AAI17776 Q0IJ79

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ifna9 NP_034637 M.musculus Ifna6 15969 Gene Info NP_996754 87
M.musculus Ifna12 242519 Gene Info NP_796335 85
M.musculus Ifna1 15962 Gene Info NP_034632 85
M.musculus Ifnab 15974 Gene Info NP_032362 85
M.musculus Ifna5 15968 Gene Info NP_034635 85
M.musculus Ifna13 230396 Gene Info NP_796321 84
M.musculus Ifna14 404549 Gene Info NP_996858 83
M.musculus Gm12597 242517 Gene Info NP_996753 82
M.musculus Ifna7 15970 Gene Info NP_032360 82
M.musculus Ifna2 15965 Gene Info NP_034633 81
M.musculus Ifna11 15964 Gene Info NP_032359 81
M.musculus Gm13280 230398 Gene Info NP_996750 80
R.norvegicus Ifna5 690894   XP_001076062 75
R.norvegicus LOC680208 680208   XP_001056120 75
R.norvegicus RGD1561246 502959   XP_578464 72
H.sapiens IFNA1 3439 Gene Info NP_076918 65
H.sapiens IFNA13 3447 Gene Info NP_008831 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)