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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ifna7, Interferon alpha 7
Sequence ID:NM_008334
Entrez Gene ID:15970
Ensembl ID:ENSMUSG00000070907

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 C4|4 42.6

Chromosomal Position (from UCSC)

Chromosomal Position:4: 88816227 - 88816800

NM_008334 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15768846212888462703

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40141930Full LengthBC130231interferon alpha 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032360  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008334 NP_032360 Q810G6 Interferon

Related Sequences

 
mRNAGenPeptSwissProt
BC130231 AAI30232 Q810G6
XM_003946134 XP_003946183  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ifna7 NP_032360 M.musculus Gm12597 242517 Gene Info NP_996753 89
M.musculus Ifna1 15962 Gene Info NP_034632 89
M.musculus Ifna6 15969 Gene Info NP_996754 88
M.musculus Ifna12 242519 Gene Info NP_796335 87
M.musculus Ifna5 15968 Gene Info NP_034635 86
M.musculus Ifnab 15974 Gene Info NP_032362 85
M.musculus Ifna13 230396 Gene Info NP_796321 84
M.musculus Ifna14 404549 Gene Info NP_996858 84
M.musculus Ifna9 15972 Gene Info NP_034637 82
M.musculus Ifna11 15964 Gene Info NP_032359 82
M.musculus Ifna2 15965 Gene Info NP_034633 81
M.musculus Gm13280 230398 Gene Info NP_996750 81
R.norvegicus RGD1561246 502959   XP_578464 78
R.norvegicus LOC680208 680208   XP_001056120 76
R.norvegicus Ifna5 690894   XP_001076062 76
H.sapiens IFNA1 3439 Gene Info NP_076918 61
H.sapiens IFNA13 3447 Gene Info NP_008831 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)