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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ifna5, interferon alpha 5
Sequence ID:NM_010505
Entrez Gene ID:15968
Ensembl ID:ENSMUSG00000096682

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 C4|4 42.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 88835524 - 88836094

NM_010505 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15708848142888481997

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40091152Full LengthBC120910interferon alpha 5
40091153Full LengthBC120911interferon alpha 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034635  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010505 NP_034635   Interferon

Related Sequences

 
mRNAGenPeptSwissProt
BC120910 AAI20911 Q810G2
BC120911 AAI20912 Q810G2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ifna5 NP_034635 M.musculus Ifna6 15969 Gene Info NP_996754 90
M.musculus Ifna1 15962 Gene Info NP_034632 90
M.musculus Gm12597 242517 Gene Info NP_996753 88
M.musculus Ifnab 15974 Gene Info NP_032362 88
M.musculus Ifna13 230396 Gene Info NP_796321 87
M.musculus Ifna7 15970 Gene Info NP_032360 86
M.musculus Ifna12 242519 Gene Info NP_796335 86
M.musculus Ifna9 15972 Gene Info NP_034637 85
M.musculus Ifna14 404549 Gene Info NP_996858 84
M.musculus Gm13280 230398 Gene Info NP_996750 83
M.musculus Ifna11 15964 Gene Info NP_032359 83
M.musculus Ifna2 15965 Gene Info NP_034633 82
R.norvegicus RGD1561246 502959   XP_578464 80
R.norvegicus LOC680208 680208   XP_001056120 79
R.norvegicus Ifna5 690894   XP_001076062 79
H.sapiens IFNA13 3447 Gene Info NP_008831 63
H.sapiens IFNA1 3439 Gene Info NP_076918 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)