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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ifna11, interferon alpha 11
Sequence ID:NM_008333
Entrez Gene ID:15964
Ensembl ID:ENSMUSG00000070906

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 C4|4 42.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 88819918 - 88820565

NM_008333 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16478846582288466468

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40126189Full LengthBC116870interferon alpha 11
40126191Full LengthBC116872interferon alpha 11

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032359  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008333 NP_032359 Q61716 Interferon

Related Sequences

 
mRNAGenPeptSwissProt
BC116870 AAI16871 Q61716
BC116872 AAI16873 Q61716

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ifna11 NP_032359 M.musculus Ifna2 15965 Gene Info NP_034633 89
M.musculus Ifna1 15962 Gene Info NP_034632 88
M.musculus Ifna12 242519 Gene Info NP_796335 86
M.musculus Ifna6 15969 Gene Info NP_996754 85
M.musculus Ifnab 15974 Gene Info NP_032362 84
M.musculus Gm12597 242517 Gene Info NP_996753 83
M.musculus Ifna14 404549 Gene Info NP_996858 83
M.musculus Ifna5 15968 Gene Info NP_034635 83
M.musculus Gm13280 230398 Gene Info NP_996750 83
M.musculus Ifna7 15970 Gene Info NP_032360 82
M.musculus Ifna13 230396 Gene Info NP_796321 82
M.musculus Ifna9 15972 Gene Info NP_034637 81
R.norvegicus LOC680208 680208   XP_001056120 76
R.norvegicus Ifna5 690894   XP_001076062 76
R.norvegicus RGD1561246 502959   XP_578464 76
H.sapiens IFNA13 3447 Gene Info NP_008831 60
H.sapiens IFNA1 3439 Gene Info NP_076918 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)