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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ccny, cyclin Y
Sequence ID:NM_026484
Entrez Gene ID:67974
Ensembl ID:ENSMUSG00000024286

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:18 A1|18

Chromosomal Position (from UCSC)

Chromosomal Position:18: 9449136 - 9450003

NM_026484 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1262993140419316669
2630279293194069319568
2793295993327819332947
2960307993451919345310
3080313793454119345468
3138317393493859349420
3174327493534049353504
3275330993777919377825
3310338493867329386806
3385401794495159450147

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3995040Full LengthBC023321cyclin Y
4974858Full LengthBC035524cyclin Y

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080760  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026484 NP_080760 Q8BGU5 Cyclin_N

Related Sequences

 
mRNAGenPeptSwissProt
BC023321 AAH23321 Q8BGU5
BC035524 AAH35524 Q8BGU5
AK017493 BAB30772 Q8BGU5
AK028696 BAC26071 Q8BGU5
AK076556 BAC36391 Q8BGU5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ccny NP_080760 R.norvegicus Ccny 361261   XP_341546 100
H.sapiens CCNY 219771 Gene Info NP_659449 98
D.melanogaster CycY 34593   NP_609519 71
A.gambiae AgaP_AGAP008969 1279933   XP_319719 70
C.elegans ZK353.1 176188   NP_498858 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)