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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ccl26, chemokine (C-C motif) ligand 26
Sequence ID:NM_001013412
Entrez Gene ID:541307
Ensembl ID:ENSMUSG00000070464

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G2|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 135560447 - 135563569

NM_001013412 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
197136036317136036413
98212136039166136039280
213282136039369136039438

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062179Full LengthBC156679chemokine (C-C motif) ligand 26
100015551BC148586chemokine (C-C motif) ligand 26

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001013430  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001013412 NP_001013430 Q5C9Q0 IL8

Related Sequences

 
mRNAGenPeptSwissProt
BC148586 AAI48587  
BC156679 AAI56680  
AY587128 AAT68481 Q5C9Q0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ccl26 NP_001013430 R.norvegicus Ccl26 685958   NP_001102958 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)