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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Xrcc4, X-ray repair complementing defective repair in Chinese hamster cells 4
Sequence ID:XM_003945936
NM_028012
Entrez Gene ID:108138
Ensembl ID:ENSMUSG00000021615

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 C3|13

Chromosomal Position (from UCSC)

Chromosomal Position:13: 89848917 - 90089513

NM_028012 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
185608998852589989067
5617089008056690080713
7098009013067790130768
8019539013205890132210
95411209014052290140688
112112969020161390201788
129714459021114590211293
144615579022910190229212

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5257949Full LengthBC025538X-ray repair complementing defective repair in Chinese hamster cells 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082288  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_028012 NP_082288   XRCC4

Related Sequences

 
mRNAGenPeptSwissProt
BC025538 AAH25538 Q924T3
AK009951 BAB26604 Q924T3
AB055154 BAB62316 Q924T3
AK053612 BAC35447 Q924T3
AK088281 BAC40256 Q924T3
XM_003945936 XP_003945985  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Xrcc4 NP_082288 R.norvegicus Xrcc4 309995   NP_001007000 88
H.sapiens XRCC4 7518 Gene Info NP_071801 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)