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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cryz, crystallin, zeta
Sequence ID:NM_009968
Entrez Gene ID:12972
Ensembl ID:ENSMUSG00000028199

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 H4|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 154597226 - 154623180

NM_009968 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1273154259975154260247
274397154267855154267978
398550154269342154269494
551714154274373154274536
715766154276785154276836
767916154281423154281572
9171024154284444154284551
10251120154284642154284737
11212206154285060154286145

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3492859Full LengthBC003800crystallin, zeta
6404996Full LengthBC043076crystallin, zeta

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034098  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_009968 NP_034098 P47199 EC 1.6.5.5 ADH_zinc_N
ADH_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
S70056 AAB30620 P47199 EC 1.6.5.5
BC003800 AAH03800 P47199 EC 1.6.5.5
BC043076 AAH43076 Q80XR3  
D78646 BAA11463 P47199 EC 1.6.5.5
AK134281 BAE22081 Q3UYY0  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cryz NP_034098 R.norvegicus Cryz 362061   NP_001012183 95
H.sapiens CRYZ 1429 Gene Info NP_001123514 81
C.elegans F39B2.3 173346   NP_493577 43
A.thaliana AT5G61510 836272   NP_200959 32
N.crassa NCU04443 3873651   XP_957520 32
S.cerevisiae ZTA1 852335   NP_009602 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta