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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ptp4a1, protein tyrosine phosphatase 4a1
Sequence ID:NM_011200
Entrez Gene ID:19243
Ensembl ID:ENSMUSG00000026064

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1 B|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 30940303 - 30942737

NM_011200 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3990529Full LengthBC094447protein tyrosine phosphatase 4a1
6396041Full LengthBC055039protein tyrosine phosphatase 4a1
9087885Full LengthBC150972protein tyrosine phosphatase 4a1
9087894Full LengthBC150981protein tyrosine phosphatase 4a1
30538771Full LengthBC086787protein tyrosine phosphatase 4a1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035330  

Protein Infomation

NM_011200 NP_035330 Q63739 EC Y_phosphatase

Related Sequences

U84411 AAB58913 Q63739 EC
BC055039 AAH55039 Q63739 EC
BC086787 AAH86787 Q63739 EC
BC094447 AAH94447 Q63739 EC
BC150972 AAI50973 B9EKL6  
BC150981 AAI50982 B9EKL6  
AK081491 BAC38233 Q63739 EC
AK148288 BAE28460 Q63739 EC
AK150506 BAE29619 Q63739 EC
AK151533 BAE30480 Q63739 EC

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Ptp4a1 NP_035330 H.sapiens PTP4A1 7803 Gene Info NP_003454 100
R.norvegicus LOC100360241 100360241   XP_002730075 100
R.norvegicus Ptp4a1 29463   NP_113767 100
A.gambiae AgaP_AGAP008708 1275558   XP_314814 59
D.melanogaster PRL-1 34952   NP_723956 59
C.elegans prl-1 180677   NP_508683 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)