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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Plod1, procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
Sequence ID:NM_011122
Entrez Gene ID:18822
Ensembl ID:ENSMUSG00000019055

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 E2|4 76.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 147910060 - 147936704

 Exon Info From UCSC:
NM_011122

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3589182Full LengthBC010268procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
3965301Full LengthBC006599procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035252  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_011122 NP_035252 Q9R0E2 EC 1.14.11.4 2OG-FeII_Oxy

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF046782 AAD54617 Q9R0E2 EC 1.14.11.4
BC006599 AAH06599 Q9R0E2 EC 1.14.11.4
BC010268 AAH10268 Q91Z26  
AK131632 BAE20730 Q3V2R7  
AK157729 BAE34174 Q3TZN4  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Plod1 NP_035252 R.norvegicus Plod1 116552   NP_446279 96
H.sapiens PLOD1 5351 Gene Info NP_000293 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)